Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823636.1_cds_XP_016501568.1_15285
CDS Infomation

[gene=LOC107819903] [db_xref=GeneID:107819903] [protein=putative late blight resistance protein homolog R1B-23] [protein_id=XP_016501568.1] [location=44798..47113] [gbkey=CDS]
Sequence

ATGGAGGTTGTTGAGACGTGTGAAAAAAGATCTCAAGCTCATGCAATGCCTTCTACCCAA
CGTAGTTTTCCATCAATTGATGATGAAGTTGTGGGATTTGCGAAAGATGCAGAATATGTA
ATGAAGAAATTGACCGGAGGATCAAAGGAGCTCGACGTTATCTCAATCTTTGGAATGGCC
GGACTTGGTAAAACAACATTGGCAAGAAAAGTGTACAACAATACCTCTATCATTAATCAC
TTTGATGTTCAAGCATGGTGTACTGTTTCACAAACATATAACATGAGGACGTTGTTGGTT
GATATTCTTGAACAAGCTACAAATAAGGAGTGGAAAATCAAAGAGGACTTCGACATAGCT
GACAAGTTGCAGAAGACTCTAAAAGGCAGGAGATACCTCATTGTCTTAGATGATATATGG
AAAGTTGAGGTGTGGGAAGACCTGGGATTATGTTTCCCTAAAGGTCAGGATGGAAGCAGA
GTAATAGTAACAACTCGAATTGAAGAAGTGGCTAAGCATCTTCAACACCACAGTGATCCT
TATTCTCTTAGATTTCTAACACTGGAAGAGAGTTGGGAATTATTGCAGAAAAGAGTATTT
CAAGGAGAGAGTTGTCCCCTGGATCTACGGGAAGCAGGGTTAAAAGTTGCCAAACATTGT
AAGGGATTGCCTCTTGTCATTGTGTTGATTGCTGGAATTATAGTGAAAACGGAAAGGGAG
GCATCCTTGTGGCTGGAGTTTGCCAATGACTTACGTTCTCATGTTTTAGGAGAGCAGAGC
ATGAAGGTAATACAATCAAGTTATGAGCATTTAGAAGACCACTTAAAGCCTTGCCTTCTT
TACATGGGATTGTTTCCAGAAGACCATAAAATTCCAGTGCATGATTTGCTGAAGTTGTGG
ATGGCTGAAGAGTTTGTAGTGAATGTTGACACAGAGAACATGGAGGAAGCATCAAGATTT
TGCTTGAACGATCTACTTAAGAGAAGCCTTGTAATGGTCTCTAGAAGGAGAATTAATGGT
GACATAGAATGCTGCACACTTCATGATGTAGTGCGTGAATTTTGCTTGAGAAAACTTGCA
GAAGAAAAGTTTATGCAGCTCACAGTGCCATACAATCCATATGATCAACATTTGTATCCC
CAAGAATCACGGTTATGCATTTATATTCATGATGATCTTGTTAATCAATTAGATCATTCT
GCATATATGTTGGATAAGATTCCAATGCTCGAGTCCAAGTACACAAAGTGTTTTGGTGAA
TGTCCTAGGTCTTTGGAGTTCATTGCTCATCCGAAATTCAACACATGGAACAGATCAAAT
CCTTTACCATTACTTGTTAAACTAAGACTTGTTCGGGTGTTGAATTTGATGAAAGTGGAG
TTGCCAAGTTCTTGGGCTACATCAGTACAATCGCTAACTCACTTGAGGTACCTTGAGATT
TTTGTCGAAGAATTTGATTTCAAGTGGATATCACATCTACATGAGCTTCAGACTCTAGTG
GTTGATTCAGTTCAATTTCTAAGGACATCGCCTGCAGCTATCTGGAAAATGATGAAGCTA
AGGCATGTGAATATAAACAGATTGACCAGTGTATGGGAAGACAATGATGGAGCAATTTTT
GAAGAATCTTCAACAACTATGCTAGAGAACTTGAAGACCTTCCTCTCTTGTCGTATACGT
CTGGATGAGAAAAATCCAAGGTTCTGGTGGTGGTTCCCCAATCTTGAAGAACTCAGCCTC
CGCATTATTGCTGATGTACCTAGTTGTCCTTTGTTTCCCATACCGGAAGTTCATGCTCAC
CTTCAATCTCTTGATCTGGTTATAAGCCCTAAGGGATTCTGGAATTCAGTTGGATGGGAG
AGCTACTTTGTCTTGCCGTCAAATCTCAGGCATTTGTGCATTGGCGGTTGTTTCTTGACG
AAAGAAATGGTTTCAAACATTGCAAGATTGCAGAGGCTTGAGAGTCTTAGATTAGAGATA
GGATTTCCGTTGGGGAATGTAGAGTACTGTTGGGACGTGAGAAATGTCGAGTTCCCTGCA
CTCAAATACTTGTCACTATTAGCTGTGAGGATGGTAGTATGGAATGCTTCAGATGCATCT
TTTCCCATGCTTGAGAAGCTAGTTCTAAGAAATTGTTACTACTTCAAGGAGATACCTCCC
AGCTTTGTGGATATTCCAACCTTTCGACTAATTGAACTGTTTGACTGTCCGGACTCTATT
GTGGTTTCAGCTATGGATATTAAAACAGAAATTGAAGAAAACACTGGATGTGACAGTCTC
CAAGTTCTTATATCCAATACACCTCCTACTTATTAA

Peptide Sequence

PEP ID

XP_016501568.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-23 [Nicotiana tabacum]
Sequence

MEVVETCEKRSQAHAMPSTQRSFPSIDDEVVGFAKDAEYVMKKLTGGSKELDVISIFGMA
GLGKTTLARKVYNNTSIINHFDVQAWCTVSQTYNMRTLLVDILEQATNKEWKIKEDFDIA
DKLQKTLKGRRYLIVLDDIWKVEVWEDLGLCFPKGQDGSRVIVTTRIEEVAKHLQHHSDP
YSLRFLTLEESWELLQKRVFQGESCPLDLREAGLKVAKHCKGLPLVIVLIAGIIVKTERE
ASLWLEFANDLRSHVLGEQSMKVIQSSYEHLEDHLKPCLLYMGLFPEDHKIPVHDLLKLW
MAEEFVVNVDTENMEEASRFCLNDLLKRSLVMVSRRRINGDIECCTLHDVVREFCLRKLA
EEKFMQLTVPYNPYDQHLYPQESRLCIYIHDDLVNQLDHSAYMLDKIPMLESKYTKCFGE
CPRSLEFIAHPKFNTWNRSNPLPLLVKLRLVRVLNLMKVELPSSWATSVQSLTHLRYLEI
FVEEFDFKWISHLHELQTLVVDSVQFLRTSPAAIWKMMKLRHVNINRLTSVWEDNDGAIF
EESSTTMLENLKTFLSCRIRLDEKNPRFWWWFPNLEELSLRIIADVPSCPLFPIPEVHAH
LQSLDLVISPKGFWNSVGWESYFVLPSNLRHLCIGGCFLTKEMVSNIARLQRLESLRLEI
GFPLGNVEYCWDVRNVEFPALKYLSLLAVRMVVWNASDASFPMLEKLVLRNCYYFKEIPP
SFVDIPTFRLIELFDCPDSIVVSAMDIKTEIEENTGCDSLQVLISNTPPTY

Transcript Sequence

Gene sequence data has not been registered.